Package: PAmeasures 2.0.0.9000

PAmeasures: Performance Assessment for Continuous and Survival Outcomes

Evaluates prediction accuracy for continuous outcomes and the predictive performance of survival models in a unified framework. Implements the R-squared, L-squared, pseudo R-squared and related explained variation measures of Li and Wang (2019) <doi:10.1080/01621459.2018.1515079>, the concordance indices of Harrell et al. (1982) <doi:10.1001/jama.1982.03320430047030> and Uno et al. (2011) <doi:10.1002/sim.4154>, the time-dependent area under the receiver operating characteristic curve (AUC) of Heagerty, Lumley and Pepe (2000) <doi:10.1111/j.0006-341X.2000.00337.x>, and the Brier score of Graf et al. (1999) <doi:10.1002/(SICI)1097-0258(19990915/30)18:17/18%3C2529::AID-SIM274%3E3.0.CO;2-5>. Supports right-censored data; competing risks, following Wolbers et al. (2014) <doi:10.1093/biostatistics/kxt059>, Wu and Li (2018) <doi:10.1002/sim.7806> and Zhuang et al. (2025) <doi:10.48550/arXiv.2507.15040>; and two-phase sampling designs such as case-cohort and nested case-control studies, following Lee, Zeleniuch-Jacquotte and Liu (2021) <doi:10.1080/02664763.2020.1861225>. Revives and expands the original 'PAmeasures' package with a unified interface for survival prediction assessment.

Authors:Tong Zhu [aut], Zian Zhuang [aut, cre], Wen Su [aut], Xiaowu Dai [aut], Xiaoyan Wang [aut], Gang Li [aut]

PAmeasures_2.0.0.9000.tar.gz
PAmeasures_2.0.0.9000.zip(r-4.7-any)PAmeasures_2.0.0.9000.zip(r-4.6-any)PAmeasures_2.0.0.9000.zip(r-4.5-any)
PAmeasures_2.0.0.9000.tgz(r-4.6-any)PAmeasures_2.0.0.9000.tgz(r-4.5-any)
PAmeasures_2.0.0.9000.tar.gz(r-4.7-any)PAmeasures_2.0.0.9000.tar.gz(r-4.6-any)
PAmeasures_2.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PAmeasures/json (API)

# Install 'PAmeasures' in R:
install.packages('PAmeasures', repos = c('https://larryzza.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/larryzza/pameasures/issues

Datasets:

On CRAN:

Conda:

4.04 score 54 downloads 21 exports 117 dependencies

Last updated from:cff137707f. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK211
source / vignettesOK353
linux-releaseOK186
macos-releaseOK184
macos-oldrelOK249
windows-develOK189
windows-releaseOK208
windows-oldrelOK173
wasm-releaseOK154

Exports:pa_calibrationpa_calibration_crpa_case_cohort_weightspa_evaluate_two_phasepa_fit_and_evalpa_metric_namespa_nested_case_control_weightspa_nlmpa_plot_predpa_plot_summarypa_predict_cifpa_predict_coxphpa_predict_survregpa_sample_designpa_sim_cox_weibullpa_simulate_fine_graypa_summarizepa_summarize_crpa_survival_evalpa_survival_eval_crpam.nlm

Dependencies:backportsbase64encbslibcachemcheckmatecliclustercmprskcodetoolscolorspacecpp11data.tablediagramdigestdoParalleldplyrevaluatefarverfastmapfontawesomeforeachforeignFormulafsfuturefuture.applygenericsggplot2glmnetglobalsgluegridExtragtablehardhathighrHmischtmlTablehtmltoolshtmlwidgetsisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglatticelavalifecyclelistenvmagrittrMASSMatrixMatrixModelsmemoisemetsmgcvmimemultcompmvtnormnlmennetnumDerivparallellypatchworkpbapplypecpillarpkgconfigplotrixpmcalibrationpolsplineprodlimprogressrPublishpurrrquantregR6rangerrappdirsRColorBrewerRcppRcppArmadilloRcppEigenriskRegressionrlangrmarkdownrmsrpartrstudioapiS7sandwichsassscalesshapeSparseMsparsevctrsSQUAREMstringistringrsurvivalsurvivalROCtdROCTH.datatibbletidyrtidyselecttimeregtinytexutf8vctrsviridisLitewithrxfunyamlyardstickzoo